bnp

Some older Bayesian nonparametrics research.
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commit 66a9a5706a992e5bf0e8e0579d56cdaf143f883d
parent e636ba1ac2f0c1b5bdbc1239ec88f0997a12fe4b
Author: Jared Tobin <jared@jtobin.ca>
Date:   Sun, 21 Feb 2016 13:12:26 +1300

Add CRP simulation.

Diffstat:
Achinese-restaurant-process/src/simulation_crp.r | 25+++++++++++++++++++++++++
1 file changed, 25 insertions(+), 0 deletions(-)

diff --git a/chinese-restaurant-process/src/simulation_crp.r b/chinese-restaurant-process/src/simulation_crp.r @@ -0,0 +1,25 @@ +require(dplyr) +require(ggplot2) +require(reshape2) + +source('crp.r') + +design = expand.grid(epochs = 100, n = 1000, a = c(1, 10, 100)) + +simulate = function(epochs, n, a) replicate(epochs, list(crp(n, a))) + +experiment = apply( + design + , MARGIN = 1 + , function(row) { simulate(row[1], row[2], row[3]) } + ) + +results = melt(experiment, id.vars = 'table') +by_concentration = group_by(results, table = table, settings = factor(L1)) +summarised = summarise(by_concentration, customers = mean(value)) + +log_log_plot = + ggplot(summarised, aes(table, customers, fill = settings, colour = settings)) + + geom_point(alpha = 0.8) + + scale_x_log10() + scale_y_log10() +